Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820785.1_cds_XP_016500540.1_14357
CDS Infomation

[gene=LOC107818975] [db_xref=GeneID:107818975] [protein=two-component response regulator-like APRR1] [protein_id=XP_016500540.1] [location=complement(join(96063..97006,99970..100063,101026..101193,101595..101728,101816..101977,102728..102860))] [gbkey=CDS]
Sequence

ATGGAGAAGAGGGAGATTGTTAAGAGTGGGGAAGGGTTTATTGATAGGAGCAAAGTGCGG
ATTTTACTGTGTGATAACGATGCCAAGAGCTCTCAGGAGGTTTTTACGCTCTTGTGCAAA
TGCTCTTATCAAGTGACTTCGGTGAGGTCACCCAGGCAGGTGATTGATGCACTGAATGCT
GAAGGACCTGATATTGATATCATCCTTTCTGAAGTTGACCTTCCTATGTCTAAAGGATAT
AAGATGCTGAAATACATCATGAGGGATAAAGAGCTGAGGCGCATTCCAGTGATCATGATG
TCATCGGAAGATGAAGTCTCTATTGTTGTCAAGTGCCTCAAATTTGGAGCAGCTGACTAC
CTTGTAAAGCCTCTCCGCACTAATGAGCTGTTGAACTTGTGGACTCACATGTGGAGAAGA
AGGCAAATGCTTGGACTAGCAGAGAAGAACATCTTAAGTTATGACTTTGATTTGGTTGTA
TCAGACCCCAGCGATCCTAACACAAATAGCACTACTCTTTTCTCTGATGATACCGATGAT
AGGTCCCGGAAGAGTGTCAATCTGGAAGCATGTCCCTCTATTCAGCAAGAAGACGAGGTT
AATGCTTCCACTGCTGCTCCTATAGAGACTGCCATTGTGTTTCCATCTGAGTGTCAGTCT
GATGTGCCAGGAACTAATGAACGGCAGACAGGACAAATTTCCTTATTTCCTAAGAAGAGT
GAACTGAAGATAGGTGGGTCCTCGGCCTTCTTTACCTATGTCAAATCAGGCGTTCTTACA
ACCAATGACCAAGGAACAACCTGCACCCACGAAAATGTGCCTCAGTTGAGAATTGAAGAG
AAGACTAATGCAGTCGATGGGCATCTAGAGATTGAAACTCAAATGCAAGTAAATGGAGAT
GCAGTTGAAAATAATTCACAAGGCGATGACTATCCAAGTAGTAACAGTTTTCCAGAGTCG
TATTCCATGGAAAGGTCCTGTACTCCCCCTTTGTCATTAGAGTTAACGCAACAGAGGAAC
TCAAAGATGGAAGAGTTCTCGCAGGTGTACATGCATCCACGCAATGAAGCTCAGCGTGAT
GCTGTGAGTTTTCATGCACAAACTGCTTATTCCTATTTTGTTTCTGGAGCAATGAATCAA
GTCATGATGCCATCACCACATATTTATCAGAAGAACCTGCAAGATCTCCACAACCATGCT
AATTCAGCTGTACTTCCTCCATACAACCATATGCCTCCTTGTCCCCCTCATATGCATGGG
ATGGCATCATTTCCTTACTACCCTATGGGCCTATGCTTACAACCTGGCCAAATGCCAATA
CCGCATCAGTGGCCTACAATTGGAAATTTGCCTTCGGCTGAAGGAAAGGGGAGCAAAGTT
GATCGTAGAAAGGCAGCACTTATGAAGTTCAAACAGAAGAGAAAGGAAAGATGTTTTGAC
AAGAAGATCAGGTATGTTAACAGAAAAAAGCTGGCAGAACGGAGACCTCGTGTGAGGGGA
CAGTTTGTTAGGAAGGTCAATGGTGTGAATGTGGATCTTAATGGGCATCCTGCTTCAGCA
GATTATGATGAGGAGGAGGAGGAACAAACAGGAAATTTTGATTCACCTGAGGATGATCAA
TCGATGTGTCTATGA

Peptide Sequence

PEP ID

XP_016500540.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR1 [Nicotiana tabacum]
Sequence

MEKREIVKSGEGFIDRSKVRILLCDNDAKSSQEVFTLLCKCSYQVTSVRSPRQVIDALNA
EGPDIDIILSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSSEDEVSIVVKCLKFGAADY
LVKPLRTNELLNLWTHMWRRRQMLGLAEKNILSYDFDLVVSDPSDPNTNSTTLFSDDTDD
RSRKSVNLEACPSIQQEDEVNASTAAPIETAIVFPSECQSDVPGTNERQTGQISLFPKKS
ELKIGGSSAFFTYVKSGVLTTNDQGTTCTHENVPQLRIEEKTNAVDGHLEIETQMQVNGD
AVENNSQGDDYPSSNSFPESYSMERSCTPPLSLELTQQRNSKMEEFSQVYMHPRNEAQRD
AVSFHAQTAYSYFVSGAMNQVMMPSPHIYQKNLQDLHNHANSAVLPPYNHMPPCPPHMHG
MASFPYYPMGLCLQPGQMPIPHQWPTIGNLPSAEGKGSKVDRRKAALMKFKQKRKERCFD
KKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGHPASADYDEEEEEQTGNFDSPEDDQ
SMCL

Transcript Sequence

Gene sequence data has not been registered.